General Information

Database accession: MF7000821

Name: TM107

PDB ID: 1ilv PDBe

Experimental method: X-ray (2.00 Å)

Assembly: Homodimer

Source organism: Thermotoga maritima

Primary publication of the structure:

Zhang RG, Skarina T, Katz JE, Beasley S, Khachatryan A, Vyas S, Arrowsmith CH, Clarke S, Edwards A, Joachimiak A, Savchenko A
Structure of Thermotoga maritima stationary phase survival protein SurE: a novel acid phosphatase.

(2001) Structure 9: 1095-106

PMID: 11709173 PubMed

Abstract:

Not available.


Function and Biology Annotations from the GeneOntology database. Only terms that fit at least two of the interacting proteins are shown.

Molecular function:

3'-nucleotidase activity 3'-nucleotidase activity GeneOntology

5'-nucleotidase activity 5'-nucleotidase activity GeneOntology

exopolyphosphatase activity exopolyphosphatase activity GeneOntology

metal ion binding metal ion binding GeneOntology

nucleotide binding nucleotide binding GeneOntology

XMP 5'-nucleosidase activity XMP 5'-nucleosidase activity GeneOntology

Biological process: not assigned

Cellular component:

cytoplasm cytoplasm GeneOntology

Structure Summary Structural annotations of the participating protein chains.

Entry contents: 2 distinct polypeptide molecules

Chains: A, A-2

Notes: All chains according to the most probable oligomerization state stored in PDBe were considered.

Number of unique protein segments: 1


Chain A

Name: 5'-nucleotidase SurE

Source organism: Thermotoga maritima

Length: 247 residues

Sequence:Sequence according to the corresponding UniProt protein segmentMRILVTNDDGIQSKGIIVLAELLSEEHEVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKLAYNVVMDKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISSANYESPDFEGAARFLIDFLKEFDFSLLDPFTMLNINVPAGEIKGWRFTRQSRRRWNDYFEERVSPFGEKYYWMMGEVIEDDDRDDVDYKAVREGYVSITPIHPFLTNEQCLKKLREVYD

UniProtKB AC: P96112 (positions: 1-246) UniProt

Coverage: 99%

Chain A-2

Name: 5'-nucleotidase SurE

Source organism: Thermotoga maritima

Length: 247 residues

Sequence:Sequence according to the corresponding UniProt protein segmentMRILVTNDDGIQSKGIIVLAELLSEEHEVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKLAYNVVMDKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISSANYESPDFEGAARFLIDFLKEFDFSLLDPFTMLNINVPAGEIKGWRFTRQSRRRWNDYFEERVSPFGEKYYWMMGEVIEDDDRDDVDYKAVREGYVSITPIHPFLTNEQCLKKLREVYD

UniProtKB AC: P96112 (positions: 1-247) UniProt

Coverage: 100%

Evidence Evidence demonstrating that the participating proteins are unstructured prior to the interaction and their folding is coupled to binding.

Representative domain in related structures: Survival protein SurE

Evidence level: Direct evidence

Evidence coverage: The full structure participates in mutual synergistic folding.

Complex Evidence:

Two-state thermal unfolding (PMID:23409101). Domain-swapped dimer with extensive swap region and large dimer interface. Dimeric in solution (gel filtration, DLS).

Chain A:

N/A

Chain A-2:

N/A

Surface and contacts features:

Related Structure(s) Structures from the PDB that contain the same number of proteins, and the proteins from the two structures show a sufficient degree of pairwise similarity, i.e. they belong to the same UniRef90 cluster (the full proteins exhibit at least 90% sequence identity) and convey roughly the same region to their respective interactions (the two regions from the two proteins share a minimum of 70% overlap).

There are 8 related structures in the MFIB database:
The molecule viewer shows our modified stucture.

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